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Buy nowHello, Dai Boat.
I'll address your concern regarding an update on having the option to allow two separate payment accounts for two different invoices.
Since my colleague's reply from a month ago, we're still unable to use two separate payment accounts for two different invoices.
In the meantime, we can follow the workaround given by Jovychris_A. Check out their reply for more details. My colleague, JenoP, has also posted a detailed reply about the two separate payment accounts.
I can also see how the multiple payment setup for invoices would benefit your business. So just to reiterate, we'll want to send feedback to our developers regarding this option. They'll read the inputs and might consider this option for future improvements on QuickBooks (and the Payments services).
To send feedback, simply click on the Gear icon then select Feedback.
Need to check on your transactions for review in the Merchant Services Center? I'll add a couple of articles to help you pull up your statements:
Do you also need to check your financials within QuickBooks? Here's an article that would help us familiarize how to run reports: Run reports in QuickBooks Online.
Let me know if you have other concerns in managing your payments and invoices. Do you need help pulling up a specific report? Or is there an entry you need help with? Drop the details in your reply and I'll assist you.