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Buy nowGlad to see you in this thread, @AG6780. I’m here to help you track bank charges in QuickBooks.
Since your bank isn’t connected to QuickBooks Online, you can simply add the said charges as a service item and a negative amount to the invoice you created.
Here’s how:

And yes, you can bill it too. Make sure to follow the same process to get your books accurate.
You can use this guide if you want to add transactions directly to your account register: Manually add transactions to registers in QuickBooks Online. It helps you save time.
Moreover, the program offers ways to create a template for regular transactions and make customers' payments organized and connected from start to finish. For more details, see these resources:
I’ll be here to help if you need further assistance with managing your sales transactions. Just add them to your reply below. Keep safe always!