Here is what I did  Think this is working.  Go into the mapping for form MISC and when it gets to the mapping payments, click on the drop down menu and select omit payments.

Now go into the mapping for NEC and then you can access the drop down menu to choose Box 1 or whatever you need.

This has made my payments show up now.  Haven't checked to see whether I have 2 or 3 to a page but at least I have the right info on the form.