That makes sense for the deposit.  But every transaction has two sides.  For example, if you spend $20 at Mcdonald's.  Your bank account is reduced by $20 (side 1) and you would expense it to "Meals Expense" (side 2).  

So yes, the money was received and deposited into your bank account, but what is the other side.  If you send me a screenshot of how you deposited it within QB I can show you how to check. :)