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It's the same process in QuickBooks Desktop for Mac. Choose Banking, tap Make Deposits, and select the payment. Then, click the next blank row to add the wire fee. Make sure to enter it as a negative amount and don't forget to select the account you want to track the fee.
When you record the deposit, QuickBooks transfers the payment amount from Undeposited Funds to your QuickBooks bank account.
Here is an article you'll want to check for your reference: Record and make bank deposits in QuickBooks Desktop.
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