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Buy nowThanks for following up with the Community, Getittogether. I'm happy to hear your deposits are syncing successfully.
When you set QuickBooks to automatically apply payments to invoices, your payment records will be auto-posted to the oldest open invoice. With this said, sometimes you'll need to correct and re-apply payments that were applied to an incorrect invoice.
Here's how:
After completing these steps, your payment will be applied to the invoice(s) you selected.
I've also included a couple detailed resources about working with payments which may come in handy moving forward:
If there's any questions, I'm just a post away. Have a great day!