Hi there, @rrichtx77386. I'd be happy to share some details on how to handle payments in QuickBooks Online (QBO).

I can see that you're trying to set up where to record payments and process fees. The transactions before you've set up the correct account will be found in the Undeposited funds. If it's the case, you can go to the affected invoice and click on the hyperlinked amount below the PAID text at the upper-right side of the page. Then, change the Undeposited funds into the correct account. 

However, if you've got this issue after setting up the payments to its proper account, you may want to review the settings again.

If the account you've assigned isn't in the settings, you may change it. If it's there, I'd recommend contacting our Customer Care team. They have the tools to verify your account, check further what has caused this issue, and fix it. You may also request to do a screen share to have documentation of the issue.

For more information about the process, you can check out this article: Choose where to record payments and processing fees for QuickBooks Payments. It contains the step-by-step process of setting up payments transactions to the correct account.

Moreover, I've included this reference that you can use in the future when you're ready to assess your business' profits: Categorize and match online bank transactions in QuickBooks Online. You can also review the articles here for the next steps, such as reconciliation or undoing reconciliation.

I'll be around if you have any follow-up questions about payments or other concerns about QBO processes. Don't hesitate to let me know in the comment section. Take care and have a great day!