Let's make sure that you'll be able to record all your bank transactions correctly, sachinmathur.

For now, matching a single downloaded transaction to multiple vendor transactions isn't possible. You'll want to exclude the bank feeds transactions by clicking the Ignore button which is highlighted in green color. I've added a screenshot for your visual guide:

Then, manually pay the bills in Quickbooks Desktop. I've added this article for the steps: Pay Bills In QuickBooks Desktop. Additionally, you may need to review your accounts in QuickBooks to make sure they match your real-life bank and credit card statements. Please check this article for your reference: Reconcile An Account In QuickBooks Desktop.

Fill me in if you have further questions about matching transactions. Remember, the Community is always here 24/7.