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Yes, you can, @CRCInc2019.
You can use the process above share by my colleague JamesDuanT if you wish to edit the received payment that is part of the deposit.
Just ensure to use the Accounts Receivable A/R account in the account field so it can be used for closing an invoice in the future.
You can also check this article for more details about recording deposits in QuickBooks Online (QBO): Record and make bank deposits in QuickBooks Online.
Also, in case you need to record an advanced payment from your customer. You can refer to this article that can guide you through the process: Record a retainer or deposit.
If there’s anything else I can assist you with, feel free to leave a reply. I’ll be around to answer it for you. Have a great day!