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"Is it incorrect to just reduce the expense account by the discount amount? Ultimately, I'd like to handle this at the point I enter the invoice as creating a credit memo is an extra step and nuisance."
That's totally acceptable. You definitely don't need to enter a vendor credit. How you record the discount is up to you in terms of how you want to see it on your P&L and reports. Personally, I just discount the amount by the % discount when entering the bill. For example, if your bill is $1234.56 and you get a 2% discount, just enter 1234.56*.98 and let QB do the math for you. If you want to see purchase discounts as a separate line item on your P&L, then you will need to enter the discount as a separate line item on the bill or use a credit memo.