got to say that Im disturbed to read this thread.  Im a new quickbooks user and Im now seeing the amount of manual labor I have to do to keep up with the burgeoning amount to QB Payments fees that need to be assigned to classes and especially to payee's/invoices.  

It's hard for me to understand that I send out an invoice and a customer pays that invoice and the fee comes back completely unlinked to anything at all.  How is that even possible.  I might as well go back to manual entry in excel. It would be quicker.