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QBO will only consider them a match if transactions have the same amount, sharonmorrison.
You're also right that QuickBooks does not allow making a negative deposit. No worries, I have some workarounds to share that can help you reconcile these transactions.
You can exclude the downloaded transactions from your bank. Then, manually clear or record the two transactions in your bank register in QuickBooks Online. Here's how:
Once done, you can go proceed to your bank register and manually clear them if the transactions are already recorded. Here's how:
You can then proceed to reconciling your bank afterwards. Let me also share these articles for additional reference:
The Community is always here if you need anything else.