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Hi user97702,
You'll want to connect your bank account with QuickBooks Online (QBO) and let the system download your recent transactions. From there, you’ll have the option to match downloaded payments to the customer's invoices.
For more information and detailed steps, check out this link about connecting bank and credit card accounts to QBO.
Once connected, you can now match and categorise transactions in QBO.
Reach out to us if you have any other concerns. We'll be here to help. Have a good one.