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Thanks for your update, hbscoresby@optus.
I understand the need to be able to reconcile your BAS in QuickBooks Online. Here's how you can record the GST paid while you're not using the GST center in QuickBooks Online.
Then, you should be able to match the Journal entry to the payment in the bank feeds. You can check this link for a more detailed step on how to record the Journal entry when not using the GST center To record a GST Payment when you don't use the Lodge BAS function in the GST Centre.
Feel free to reply to this thread if you have more questions. We'll be sure to get back and assist you. Have a nice day!