I'm having the exact same issue.  When printing 2 1099-NEC recipients, the top half is misaligned but the bottom half is not.  Trying to fix the alignment using this online suggestion (which I've already spent a lot of time troubleshooting) doesn't work because either the top half is misaligned or the bottom half is off, they are not equally misaligned.  This has to be a software issue that Intuit needs to fix asap as 1099 deadline is approaching fast since I have multiple clients to prepare 1099s for.  I did not have this issue when preparing previous years 1099s.  Considering the amount of time I've already spent trying to get the alignment to work, at this rate I'd be more efficient hand writing them all.  Ugh.