Thank you for getting back to me. I tried what you recommended but I don't see this transactions on the audit trail. When I deleted the transactions on bank feed I had not done reconcile them into the checking account. 

I wanted to try another way that I heard once that worked. Creating another checking account in Chart of accounts with the same account number but with a difference in the name like a -1. Download the transactions again and then merge the checking accounts together. I don't know if you are familiar with this. I have not done it before so I wanted to see if you know how to do this. thank you.