I have also had this issue. When I go to archived reports I see last quarters 941 and NYS-45 available for download.  However, it looks like only the 941 has been filed by QBO.  For some reason, it seems QBO only populates the state Quarterly form but does not e-file it as well.  I know this because we received a letter from  NYS indicating they had never received the return.  Now I know I can simply attach a copy to the letter and send them a response but going forward I don't want this to be an issue.  Why does QBO only automatically file federal PR tax returns but not State?  Is this something that is affected by type of subscription?  We have QB Essentials and PR Core.  I looked at the 2 higher PR packages and there does not appear to be a difference concerning filing of forms electronically