Thank you for joining this thread, @Nnahotic.

Currently, QuickBooks Desktop (QBDT) don't have the option to set up two different stores in different locations in one company file. 

However, QBDT has a feature that can help you track every segment of your business, known as the class tracking feature. This feature will help you track account balances by department, business office or location, separate properties, or any other meaningful breakdown of your business.

For more details about the class tracking feature, please refer to this article link: Set up and use class tracking in QuickBooks Desktop. 

Also, to be up to dated about the latest product news in QuickBooks, please visit our QuickBooks blog. This article includes accounting advice, business tips and the what's new in QuickBooks. 

Feel free to leave a comment below if you have further questions. I'm always here to help you. Stay safe and take care always!